Program, Pipeline Name or Method Name

Standard repeatmodeler and repeatmasker pipeline

Program, Pipeline or Method version

Repeatmodeler1.0.8, RepeatMasker4.0.6

Source Name

H. glycines Genome Repeatmodeler Repeats

Time Executed

April 5, 2018, midnight

Category

Genome structure

Description

BuildDatabase -name genome738sl.polished.mitoFixed.fa -engine ncbi -dir /data021/GIF/remkv6/Baum/CamTechGenomeComparison/22_RepeatModeler RepeatMasker -pa 16 -gff -lib consensi.fa.classified ../genome738sl.polished.mitoFixed.fa

File

genome738sl.polished.mitofixed.fa_.out_sorted.gff_.gz

Index

genome738sl.polished.mitofixed.fa_.out_sorted.gff_.gz.tbi