Program, Pipeline Name or Method Name

masked Braker2, Class2, unmasked Braker2, Stringtie, RNASpades, Portcullis, Mikado, Cufflinks

Program, Pipeline or Method version

Mikado 1.24

Source Name

Masonbrink

Time Executed

April 16, 2021, midnight

Category

Genes

Description

These are genes that were in the original prediction of genes, yet these genes had a 30% overlap with a Repeatmasker repeat, in at least two CDS sequences.

File

orderedrepeatsbyoverlap.gff3.gz

Index

orderedrepeatsbyoverlap.gff3.gz.tbi