Program, Pipeline Name or Method Name

MEME to find Dog Box, BLAST to align GS-like effectors

Program, Pipeline or Method version

NA

Source Name

H.glycines Dog-box genes

Time Executed

April 6, 2018, midnight

Category

Genes

Description

DOG-box promoter motifs were identified with MEME. DOG-box genes were identified by co-alignment of GS like effectors from H. glycines and G. rostochiensis and enriched for Dog-box motifs 100-150 bp upstream of the start codon.

File

dorsal-likegenessorted.bed.gz

Index

dorsal-likegenessorted.bed.gz.tbi