Heterodera glycines TN10DraftAssembly

High Confidence Horizontal Gene Transfers

Program, Pipeline Name or Method Name

H. glycines high confidence HGT

Program, Pipeline or Method version

Alien Index

Source Name

H. glycines high confidence HGT

Time Executed

April 6, 2018, midnight

Category

Genes

Description

Alien Index (AI) for each transcript using a ratio of similarity to metazoan and non-metazoan sequences [Gladyshev et al. 2008]. These are the 151 genes with strong HGT support (AI>30). Gladyshev EA, Meselson M, Arkhipova IR (2008) Massive horizontal gene transfer in bdelloid rotifers. science 320:1210-1213

File

highconfhgtsorted.bed.gz

Index

highconfhgtsorted.bed.gz.tbi